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Genomics data.

Whole genomes
51,461
Projects
118
Disease groups
7

Pseudonymised. Analysed in place inside NSTDA's Secure Data Environment. No download; only aggregate results leave through an airlock review.

Data types

VCF
Variant Call Format files of small variants (SNVs and indels).
PLINK
Genotypes in PLINK binary format for population-genetic and association analysis.
HLA
HLA allele calls for immunogenetics and drug-hypersensitivity research.
CYP
Cytochrome P450 (CYP) star-allele calls for pharmacogenomics.
Structural variants
Larger genomic rearrangements such as deletions and duplications.
Demographics
Basic pseudonymised metadata such as age, sex, region and disease group.

Dataset map

118 projects in 7 disease groups. 27 links join the yearly continuations of a project; 110 join projects that study the same condition, 26 of them across groups. Hover or tap a project to see its connections; pick a topic or a group to highlight it.
  • Project (area = genomes)
  • Same project, later year
  • Shared topic
  • Shared topic across groups

Projects contributing genomes

Values as recorded by Genomics Thailand. Search, or select a column heading to sort.

Showing 1–10 of 118 projects · 51,461 genomes

Projects contributing whole genomes to Genomics Thailand, with WGS counts
00-001ServiceRare Diseases—13,017
64-128ResearchNCDStudy of genetic factors in patients at high risk for cardiovascular complications compared with controls3,700
65-115ResearchNCDGenetic characteristics associated with the development of type 2 diabetes in highland Thai populations, Thailand2,954
00-002ServiceCancerTo support services2,623
64-169ResearchCancerProject suite for developing an integrated clinical genomic assay kit for Thai cancers2,360
64-198ResearchInfectious DiseasesProject on the effects of genetics and immunity on SARS-CoV-2 infection following COVID-19 vaccination1,747
65-126ResearchNCDLongitudinal and follow-up study of chronic non-communicable diseases and risk factors among urban working-age populations in Bangkok Noi (Siriraj One Health Project)1,566
64-142ResearchPharmacogenomicsPharmacogenetics in Thai kidney transplant recipients1,272
65-040ResearchRare DiseasesStudy of the relationship between mutations and clinical presentation in neurofibromatosis patients (Year 2)1,155
64-111ResearchPharmacogenomicsStudy of pharmacogenetics of drug-induced liver injury1,108
Total51,461

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